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Reduced licence declarations for .sh files

Eoin Clerkin requested to merge e.clerkin/cbmroot:licence3 into master

Inserts the declaration on the 1st or 2nd line of scripts.

# Copyright (C) YYYY "Name of Institute", "City"
# distributed under the GNU General Public License Version 3
# First commited by "First-Name Surname"
EMPTY LINE

Edited by Eoin Clerkin

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